CDS

Accession Number TCMCG016C16779
gbkey CDS
Protein Id OMO72433.1
Location join(54427..54816,55307..55408,55878..56189,56422..56473,56773..56941,59580..60135,60533..60695,62185..62387)
Organism Corchorus capsularis
locus_tag CCACVL1_17808

Protein

Length 648aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011423.1
Definition hypothetical protein CCACVL1_17808 [Corchorus capsularis]
Locus_tag CCACVL1_17808

EGGNOG-MAPPER Annotation

COG_category A
Description 29 kDa ribonucleoprotein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11294        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05130        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0008266        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009631        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010319        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCAACATCTGCCTCATCTCTTATTCTTCCATCTCTCAAACCCAAAACCTTATCTTCATCAAACCCTAGACCCATTTCAGTTTCCCTCTTCTCTGCTTCCTACAAGCTTCATGCTAAGCCTCTCTTCTGTTCTGCTCTTCAAAGTTTTGACCTTTTAGCCAAAAAGTCTTCTTCTTCTTCTTCTTCTTCTTCTAAGTTTGTTAGAAACGTTGCCGTTTCTTCTGAGTATGGTCAGGAAGAGGAGCTTTTTGGCAGTGATGAAGAAGAAGATGCTCCCAGTTTTTCCGATGACTTGAAACTTTTTGTGGGTAATCTTCCTTTTACTGTGGATAGTGCCCAGCTTGCTGCTTTGTTTGAAAGTGCTGGAAATGTTGAGATGGTTGAGGTGATTTATGACAAGGTTACTGGGAGAAGTAGGGGTTTCGGTTTTGTGACCATGTCCTCAGCCCAGGAAGTTGAAGCTGCTGCTCAACAGTTCAATGGCTATGAACTGGAAGGAAGGGCATTGAGGGTAAACGCTGGACCTCCTCCTCCTCGTCGTAGTGAAGAATTTTCTCCTAGAGGGCGAAGAGGCGGAGGCGGTGCTCCAGCTATGGGTTCTTCAAATCGTGTGTATGTTGGTAACCTTTCATGGGGTGTTGATGATTTAGCACTTGAGACCTTGTTCAGTGAGCAAGGCAAGGTTGTAGAAGCAAAAGTCGTTTATGATAGGGACAGTGGTAGATCGAGAGGCTTTGGCTTTGTAACTTACAACTCTGCTGAAGAGGTTGACAGTGCCATTCAATCCTTGGACGGTGTTGATTTGGATGGCAGACGAATTCGAGTCTCCGTGGCAGAGTCTAGGCCAAGGCGGACACCAGGAATATGCAGCCGGAAGCTGGCGGCCGCAGCTCCTCTTGCCGTTCTTGGGGAATCTGCAAACGTCCTTTTTGTACCAGCTGGACTCGGACGTTGTGGCCATTTGACGACATCTGTCCTAGATCGGAAAGAGCCGATAATATCCATTAAAATATTTGCATTCTTCCAAAATGCTCCTGAAAAAAACCCCATTTTCACATCAACAAAGAAAGGCCAAATTTCAAAATTCATGAGCAAGATGAATTGCAAACAAGTGCCAGAGCTTCTTCCATCCCAGGTGTTTGTAAAAAAACCTGCAGTAGGCAAGGCTTTTCACAAGAAAGAACTTTCCAGGGTATTTTCAGAAGACTATAGAGTAGTGGAGAAGAAAATATTGGATCCAAGAGGACCTGAAATAAACAAATGGAACAAGCTTTTCTTAGTAGCTTGTTTGGTTTCCCTTTTCATAGACCCTTTATTCTTTTATCTGCCACAGGCTAAAAAAGGAATGTGCATGACAATTTCCCTACCTCTAGAAATTGATCTCACCGTTGTTCGGTCAGTTGTTGATGCATTTTACTTCCTTCAGATCTTTATTCGTTTCCGAACAGCTTATGTTGCTCCATCCTCTCGTGTATTTGGGAGAGGTGAGTTAGTTATAGACTCTTCCAAGATTGCTTCAAGGTACCTTCATAGAGATTTCTGGCTTGATCTTATCGCGGCGCAGCCTCTTCCACAGGTTTTAGGAGCCTCTTGGTACCTATTATCACTAGAAAGGCAAGAAGAATGCTGGAGAAAAGTGTGCAGTCTTCCTCACATAGATTGCCAATACAAGTTTTTTGACTGCAGATTTGTTCATGATCCTGACAGAGCTGCTTGGTTCAATTCAAGCAATATCTCAGCCGCTGCGGCGGCTAGTTCGCCTGAACAAGCAACGGAACAAACACTTCCGCCGGTGGCAGTAGGGTTTGCTTCGTATGCAGCAAAAATGGCAGCAAGCACTAGGTCAAGAGGTGGAAGTACTAGGTCTGGAACAGATCACTTTGACATACTAAGCTCCTTGCAAAAGCCTAATGAACCTGATTTTACAGTTGAAGATAAATAA
Protein:  
MSATSASSLILPSLKPKTLSSSNPRPISVSLFSASYKLHAKPLFCSALQSFDLLAKKSSSSSSSSSKFVRNVAVSSEYGQEEELFGSDEEEDAPSFSDDLKLFVGNLPFTVDSAQLAALFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSAQEVEAAAQQFNGYELEGRALRVNAGPPPPRRSEEFSPRGRRGGGGAPAMGSSNRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRDSGRSRGFGFVTYNSAEEVDSAIQSLDGVDLDGRRIRVSVAESRPRRTPGICSRKLAAAAPLAVLGESANVLFVPAGLGRCGHLTTSVLDRKEPIISIKIFAFFQNAPEKNPIFTSTKKGQISKFMSKMNCKQVPELLPSQVFVKKPAVGKAFHKKELSRVFSEDYRVVEKKILDPRGPEINKWNKLFLVACLVSLFIDPLFFYLPQAKKGMCMTISLPLEIDLTVVRSVVDAFYFLQIFIRFRTAYVAPSSRVFGRGELVIDSSKIASRYLHRDFWLDLIAAQPLPQVLGASWYLLSLERQEECWRKVCSLPHIDCQYKFFDCRFVHDPDRAAWFNSSNISAAAAASSPEQATEQTLPPVAVGFASYAAKMAASTRSRGGSTRSGTDHFDILSSLQKPNEPDFTVEDK